Archive for the 'information policy' category

Unexpected impacts of federal budget monkey business

Many government organizations are responding to the sequestration and various budget cuts by, among other things, cancelling support for conferences and cancelling all scientist and engineer travel to conferences.

Societies (like AIAA) are kvetching about their bottom lines, but this is really much more troubling than just the fiscal health of the societies given how important conferences are in keeping up in the field.

Scientists and engineers use conferences to meet potential collaboration partners and funders, to learn about new work, to maintain relationships formed at previous conferences, and to get feedback on their own work. Distance does still matter and in-person meetings are still important.*

Moreover, in some fields (**) conferences are archival and are relied upon for certification and distribution purposes. Other conferences are the first place new results are mentioned and many authors modify their work based on interactions at meetings ***.

We all complained bitterly during the previous administration about the funding of science and the suppression of some scientific results... but is this much better? How can government regulate well without being up on the science? Maybe this is temporary... but it doesn't look good.

__

* Olson, G. M., & Olson, J. S. (2000). Distance matters. Human-Computer Interaction, 15(2-3), 139-178. doi: 10.1207/S15327051HCI1523_4 ( there are definitely better citations for this now,... but time is limited)

** Drott, M. C. (1995). Reexamining the role of conference papers in scholarly communication. JASIS, 46(4), 299-305.

*** Garvey, W. D., Tomita, K., Lin, N., & Nelson, C. E. (1972). Research Studies in Patterns of Scientific Communication .2. Role of National Meeting in Scientific and Technical Communication. Information Storage and Retrieval, 8(4), 159-169. doi:10.1016/0020-0271(72)90001-0

 

note: it took me like weeks to write this because i kept (squirrel) getting distracted... hopefully it makes sense even if it's probably abbreviated from what I originally intended to write.

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The latest land grab in the LIS world: Citation managers

Apr 10 2013 Published by under information policy, publishing

The information industry (or whatever) seems to go through wave after wave of big land grabs with mergers and acquisitions and then series of product launches. The current one is for citation managers. You might be wondering why now? What's going on? I have some thoughts (spurred along in part by discussions in the Library Society of the World area on FriendFeed).

Citation managers have been around since at least the 1980s if not before. They're really a no-brainer for people who need to write about their research (attributing ideas gotten elsewhere) and it always surprises me that not every scholar has one set up. They're simply a database that's smart about citations/references/bibliographies. All viable ones right now take imports from research databases, the web, and digital libraries; let you search; and let you reuse information by inserting citations into documents and formatting them in your preferred format. In the past 5-10 years, newer ones are web-based or at least back-up/sync over the web, and offer some social or collaboration features.

The web-based citation managers provide a ton of very interesting data to their companies:

  • What are people reading?
  • Where are they searching (where is their data coming from)?
  • How are they reading - what in documents do they find interesting (for services that provide annotation tools)?

You start to see, then, why for-profit publishers would find this very interesting indeed.

At the same time, the publishing market is growing at a set rate, so to increase profits, publishers need to branch out into different services. Hosting pre-prints? Indexing or hosting data (too expensive)? Expanding presence into other parts of the scientist's workflow (ding!)?

By expanding their brand's presence into the writing process and the reading and analyzing the literature process, companies gain a few possible benefits:

  • more places to put ads, better data to sell more relevant (thus acceptable and profitable) ads
  • lower the friction to submit valuable articles into their journals
  • get submissions with better markup so editing and typesetting are easier (may be a pipe dream)
  • more brand loyalty?

What's in it for us? Some of these big corporations actually have very functional UX teams and have the potential of really making some improvements. Better integration of these tools with the research databases and whatnot you already use could be useful.

With respect to Elsevier and Mendeley. Sure Elsevier is evil... BUT... they do actually have some really great products and they do spend a ton of money improving them. Some of their competitors are also evil, but do not put any money back into improving their interfaces.

Your data going to help Elsevier (and a fuss coming from a Microsoft employee - give me a break!)? Yeah, well, I guess I'm of the school that I'm willing to give up some things to get better and more relevant services. To be honest, Elsevier is a known entity and that's slightly more comfortable than a start-up on venture capital looking to turn a buck. Maybe less uncertainty is better? (bring on the pitchforks and torches!)

Other acquisitions: Springer and Papers - I actually missed this news last Fall.

Also: ACS and ChemWorx (not an acquisition but a partnership, I believe).

Of course Thomson Reuters bought ProCite, EndNote, Reference Manager ages ago and now offer EndNote Web to Web of Science subscribers.

Edit 4/30: I forgot to mention that ProQuest bought RefWorks a while ago. I just read today (via) that there's now a free version of EndNote Web. Competition is good!

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Happy, happy day! OSTP issues directive to expand open access to the products of federally funded research.

So yesterday's post is obe, lol.

You might have seen the many calls to sign the We the People petition on Open Access (many tweets were tagged #OAMonday because there was a big push on a Monday to get the signatures rolling in). OSTP (the office of science and technology policy in the White House) has responded here: https://petitions.whitehouse.gov/response/increasing-public-access-results-scientific-research

The OSTP Open Access memo is here (pdf): http://www.whitehouse.gov/sites/default/files/microsites/ostp/ostp_public_access_memo_2013.pdf

So exciting, so happy. Now back to work!

News via John Dupuis who is retweeting a lot of things from around the web.

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DOE to try a publisher-sensitive pubmed central-like database?

Somehow I got on a NITRD e-mail list (probably a project I was on) and through that list I recently got an announcement of a presentation on PAGES (Public Access Gateway for Energy and Science) which is described as "a web-based portal that will ensure that, after an embargo period, scholarly publications sponsored by the Department of Energy are publicly accessible and searchable at no charge to readers."

I immediately got all excited - sounds a lot like pubmed central and woo-hoo because DOE funds a lot of research in diverse fields.

Then I read down a little ways and saw some strange caveat-like things or, well, not really weasel words but look here (emphases mine):

PAGES is designed to take advantage of the public access efforts of publishers by linking, via digital object identifiers (DOIs), to DOE articles they make publicly accessible.  Each such article serves as the Version of Record, and it is hosted by the publisher.  Thus, PAGES will avoid duplicating the public access efforts of publishers.

When DOE articles are not publicly accessible, PAGES will focus on accepted manuscripts.  Specifically, after an embargo period, it will link, via URLs, to publicly accessible manuscripts hosted by institutional repositories.  For those instances where free public access is offered neither by a publisher nor by an institutional repository, the DOE Office of Scientific and Technical Information will host the accepted manuscript and display it after an embargo period.  In both of these cases, PAGES will still provide DOI links to publishers’ websites, where articles may be accessed with a subscription or other transaction, thus maintaining a pathway to the Version of Record.

So this sounds very much like the authors were talking to the Executive Director of AIP, who was a DOE physicist (and administrator) prior to taking over at AIP. In his presentations and contributions to committees on scholarly communication he has put forth rental models, FundRef (a way to track research funding through CrossRef metadata), and links to the "version of record" at publishers all as ways to provide public access. I've already commented on rental models and knowing something exists and looking at the abstract may be intellectual access but it's not the real access that someone trying to do science needs. Publishers have long (and continuously) maintained that scientists are perfectly content with access and that, in general, access to the literature is just fine thank you very much.

So that's why I say "publisher-sensitive."

A couple of other weird things - we don't know the embargo period and it seems excessive not to even link to institutional repository copies until after the embargo. If the publisher allows immediate posting of the work in an institutional repository, then why wait? Seems strange.

Also no discussion of carrot, stick, mandate, or whatever. Will this be a condition of funding? Are they just going to crawl the web or whatever open repository harvester thingy to find these things? Hope authors volunteer publication information? Hmmm.

It looks like a similar presentation was given to CENDI.

In that presentation there's also this other thing that could have been written by publishers

Preserves the freedom of researchers to promote and disseminate their research, i.e., preserves researchers’ choice in selecting the journal to which they wish to submit manuscripts.

A bit of fud (maybe?) that publishers have been using in anti-mandate press releases is that mandates would force scientists to only publish in journals that would allow depositing of the manuscript thus taking away their freedom to select an appropriate venue. (seems to me if you publish a journal with lots of stuff funded by a mandate-having agency then you probably need to support compliance with the mandate, but that's just me.)

The original announcement also had this information:

Regardless of where DOE-sponsored articles or accepted manuscripts are hosted, PAGES will enable readers to search them all via a single search box.  Among the metadata thus returned by PAGES will be the DOI for the published article once that DOI is posted by the publisher.  PAGES will also be integrated with other DOE publicly-accessible R&D information and products, such as the 330,000 technical reports in the DOE Information Bridge

Over all definitely a good thing. I'm actually rather amused at how much they're trying to placate publishers. I guess they really don't want to get in to the lobbying and NIH-like battles. I can't say I really blame them. Limited money is best used elsewhere. I guess the proof of the pudding is in the tasting. It would be awesome if this got taken up by DOD. Really would be fabulous.

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Knowing what you know, or rather, what you've written

When I first came to work where I work now, I asked around for the listing of recent publications so I could familiarize myself with what types of work we do. No such listing existed even though all publications are reviewed for public release and all copyright transfer agreements are *supposed* to be signed by our legal office. Long story short, I developed such a listing and I populated it by having alerts on the various research databases.

Now, 9 years later, it's still running and it is even used to populate an external publications area on our expertise search app.

By its nature and how it's populated, there's absolutely no way it could be totally comprehensive and it is also time-delayed. It's probably a little better now with how fast the databases have gotten and because Inspec and Compendex now index all author affiliations and not just the first author.

Anyway, our leadership is on an innovation kick and looking at metrics to see how we compare to our peers and also if any interventions have positive effects. The obvious thing to look at is patents, but that's complicated because policies toward patenting changed dramatically over the years. They're looking now at number of publications - something I think they probably ought to note as part of being in the Sci/Tech business. My listing has been looked at, but that only started in 2003/2004. From here forward the public release database can be used... but what about older stuff? Well, in the old days the library (and the director's office) kept reprint copies of everything published. Awesome. Well, except they're kinda just bound volumes of all sorts of sizes and shapes of articles. I guess these got scanned somehow and counted, but they ended up with a few articles with no dates or citations (title and author but not venue). Three of these got passed to me to locate. They're not in the above mentioned research databases, but we know they were published (as re-prints were provided) and not in technical reports.

The answer? Google. Of course. The first was a book chapter that was cited in a special issue of a journal dedicated to the co-author. The second was a conference paper that appeared on the second author's CV (originally written in 1972 - thank goodness for old professors with electronic CVs!). The third was a conference paper cited by a book chapter indexed by Google Books. BUT to find the year, I have to request the book from the medical library... which I have done.

At least back in the day the leadership understood the value of keeping a database (print volumes) of our work. From at least 2003 until 2012, there was no such recognition. Now that I will be benchmarking us with peer organizations, I wonder if they're in the same boat or if they've keep their house in order with respect to their intellectual contributions?

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Yay SUNY Potsdam, but pondering the fungibility of chemistry journals...

Sep 12 2012 Published by under information policy, publishing

Jenica Rogers, the Director of Libraries at the State University of New York at Potsdam, has blogged that their institution will not subscribe to a big ACS (American Chemical Society) journal package for 2013. The quote that they got would make this one package over 10% of their total acquisitions budget. The reason this is so notable is that ACS is also the accreditation body for chemistry programs, and there is a list of journals a program must have access to in order to be accredited. ACS has long held that the journals - with the exception of a journal on chemical education - do not have to be ACS journals.

In her blog post she mentions alternative subscriptions to Wiley packages, Royal Society of Chemistry packages, and combining those with Elsevier journals. For the purposes of accreditation, I totally get substituting journals from one publisher  for another. For doing the chemistry, this has not been the case. Publishers have banked on must-have journals... is this no longer the case? Surely it's different because they are a smaller school? Surely it's different if you already have a severely limited chemistry journal collection?

 

And yes, I'm on fire with 3 blog posts so close together :)

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Why it's not straightforward to extend NIH's mandate and PMC to other areas of science and engineering

Feb 27 2012 Published by under information policy

I always see a lot of "it worked for NIH" .. or "it worked for NLM"... or "like PubMed".... or "like PubMed Central"... Gosh, the biomed people have great information structure, some great corpora to use for text mining research, a mandate to make the journal articles that result from federally-funded research available, a great digital library with lots of useful articles... should be an obvious thing to extend that to the other federal agencies that fund research.  Why isn't it?

I think in the case of mandates, it's absolutely crucial to consider the impact of the patient groups and non-profit organizations that provide support to patient groups.  They are a force to be reckoned with in opposition to the publishers. Society publishers and for-profit publishers both spend a great deal of money actively working to fight government open access mandates. It's the patient groups with the stories of how access or lack of access killed a child, a mother, a father, a sister, a brother, etc., that turned the tide. Remember, too, that the NIH mandate had a pretty shaky start.

There's just no equivalent in the physical sciences and engineering.

Also, in biomedicine you have more than 50 years of money going into information retrieval research to make PubMed what it is. People may complain about some aspect of the interface, but there's really a lot to it to make it work like it does.

Lookit, NASA, DOD, DOE, all have large technical report collections on the web that are freely available to the public. They are, for the most part, a bitch to search and rather unsatisfying in the results. Any one of these organizations could have done better years ago with the money they've spent. (FFS DTIC just got worse).They could have taken journal articles written by government employees and put them in their digital libraries - but they haven't. They just put the metadata in.

ERIC, the Department of Education research database has had such up and down funding- I don't even know where it stands - but it was a really useful resource. EPA is just a mess. Transportation had a decent database with reports... Justice has a few different things... but without steady funding over years and some lobbyists to fight the publisher's lobby... well, I don't think the future is that bright.

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Access to the literature: does interlibrary loan solve our problems?

Jan 11 2012 Published by under information policy

Elsewhere around the web there has been a lot of discussion of the Research Works Act (see John Dupuis' round-up, for example).  This is a bill to prevent U.S. federal agencies from mandating open access to government funded works, among other things. One of the arguments given by the publishers is that access to the literature is not a problem - everyone who needs it has several ways to get it.*  They cite these methods:

  • abstracts are free
  • institutional subscriptions
  • walk-up access for members of the community of institutional subscribers
  • pay-per-view
  • article rental
  • patient programs
  • programs to provide access to less developed countries
  • interlibrary loan (henceforth, ILL)

Abstracts, yeah, well, that's fine but...

Institutional subscriptions are for affiliates of the institution. By that I mean employees, staff, students, faculty, etc. Budgets are being cut all over the country, in some places as much as 25-30%. Even very wealthy institutions can't license everything that their users need.

Walk up access. Most of our licenses do permit walk up access. If you do live near a large research institution then this might help you. It is not acceptable, however, for government labs, for-profit companies, and other organizations that should have their own licenses to systematically send interns over to the large university to download all the needed articles.(as was mentioned in the comments to Sandra Porter's post)

Pay per view. Typically articles can be purchased for $15-$75. Sometimes that's for 24 hours worth of access, sometimes that's to download. That's never to redistribute.

Article rental. This is to look at the article online only - not to print or save down - for approximately 24 hours. This typically costs <$5. The problem is engaging fully with an article in 24 hours. What if you want to cite later and check something?

Patient programs and programs for less developed countries. I personally think these are great programs but 1) I'm not sure how many patients know about their programs and 2) there are a lot of people in developed countries who still don't have access.  Of course 1) doesn't mean that the publishers aren't trying.

ILL. Here is where we get to the purpose of my post. Can interlibrary loan solve our problems? My answer is no, and I'll tell you why.

First, you have to be affiliated with a library to request an interlibrary loan. Most people in western countries have a local public library. My local public library won't ILL articles for you and any books they ILL have to be free. Government libraries (at least the one I worked at) could also only get free articles. Did you know that many universities charge a fee to lend articles? Government libraries don't charge, but what with their budget woes there were a lot of articles to which they don't have access.

Second, ILL is not to be a substitute for a subscription. There are a set of guidelines that libraries follow. One of these is CONTU. The rule of 5 states that you can request no more than 5 articles per year from a particular journal (for journals published within the last 5 years).**  So what if there's a special issue? What if it's a really relevant journal with lots of good stuff? What you do is you go and you purchase the copyright clearances for extra copies --- or you say no. You could also pay the document delivery price (pay per view).

Third, ILL is expensive. A 1993 report calculated about $30 per transaction. If you have to pay for document delivery or copyright clearance charges or if you can only get it from some university that charges a fee, then it can be a whole lot more. Libraries are cutting services and even when they have a robust service, there's only so much an individual researcher can ask for without being seen as abusing the system.

Fourth, ILL is slow. It really is. Think of the opportunity cost. The luxury of being affiliated with two major research institutions means I have almost everything I want at my fingertips - but do people satisfice if they have to wait 2 days-3 weeks for something? Sure they do. And sometimes they wait for a crappy copy because the publisher says you have to print it first and then send fax quality (Evil empire rule).

Fifth, a crappy copy days later is not the type of engagement we need right now. We need to be able to mine, to compare, to calculate, to reuse data and tables

So no, IMO, ILL will not solve our problems.  I would be interested to hear of any other public libraries (besides perhaps NY city and maybe Cleveland) that do ILL articles for their patrons - for no fee, happily, and a bunch all the time.

With all this said, I really do wonder to whom the publishers are talking when they're hearing that people have the access they need. Are they talking to people who are at institutions like mine***? Are they talking to community college instructors? Are they talking to random members of the public?

* this argument does not address the bunch of other arguments including the one about how the taxpayer has already paid for the research and the writing up and the peer review...

** actually i think this really applies to the lender so you could probably shop around to multiple lenders to request things but it's easy to run out of lenders for expensive or rare titles

*** and hey some of our researchers are pissed because we had to drop AMS (American meteorological society) journals and a  v. v. expensive T&F remote sensing journal

update 1/12/12: Kiyomi Deards adds on twitter that some publishers limit or won't sell copyright clearance to go over 5.

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OSTP call for public comment on access to data and publications from government funded research

via Joe Hourclé on the Earth-Space Science Informatics listserv (who got it from Clifford Lynch on the CNI listserv)

The U.S. Office of Science and Technology Policy  has issued two calls for public comment. One deals with policies for access to journal articles reporting on federally funded research. This is somewhat similar to a call that was issued last year. The second covers policies related preservation, access and reuse of data created as part of federally funded research programs...

These calls can be found at

http://federalregister.gov/a/2011-28621  (data)

and

http://federalregister.gov/a/2011-28623 (publications)

This is a time when your voice can be heard in government. It's particularly important for those of you (cough chemists and physiologists cough) who are part of societies that are spreading hate and discontent about the topic instead of communicating rationally (like, for example, the physics societies). Please consider providing a comment.

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What, if anything, does Google owe us?

Jul 27 2011 Published by under information policy, Uncategorized

Google is an advertising company. They provide services - very useful services - in turn for showing us advertising. They are there to make a profit and there's absolutely nothing wrong with that.  They have a motto of not doing evil, which some people argue they don't always live up to.

So, they provide a service like search and there's no explicit agreement you need to make to use the service but their "universal terms" still hold and are accepted implicitly. You could use some sort of ad blocker to cover the ads and probably get away with it although that does violate some terms. With other services like gmail, gdocs, g+, there are explicit terms of service that you need to agree to in order to have access to the service.

For blogger, you can't post things for which you do not either have the copyright or have a license (such as creative commons) to post. In news this week (via Sir Shuping on Friendfeed), they did something pretty cool. They made it both easier for bulk DMCA takedown orders to be processed and also easier for bloggers to fight a bulk order (do a counter-notice). Why is this cool, if it's just the law and business? Well, copies of all of the takedown orders go to the Chilling Effects cease & desist clearinghouse where they are available for searching. Secondly, they don't take a sledgehammer to the problem. They move your post into draft status and you can edit it to take out the offending content and then re-post. To me, this seems entirely reasonable.

On the other hand, one of the terms of service for g+ is that you use your real name to sign up. Many people have said in many different places why this doesn't make sense - it's just stupid for Google to have this requirement and it certainly does not further their goal of preventing the morass of trolls and flames and disgusting comments that is found on YouTube. But that's not my point right now. My point is that their terms are that you must use a real name (and be a certain age) and their reaction if you don't hold up your part of the bargain is that they terminate your relationship with google across the board. They lock you out of gmail, blogger, picasa, gdocs, reader... everything.  According to this Gawker piece, it's really messed up a bunch of kids as well as the pseudonymous scientists and celebrities we've heard from. I actually don't see the part about real names in the universal terms, and there's no link from that page to google plus terms.

It's disproportionate. It's punishing instead of just doing business. It's decided algorithmically instead of by humans and clearly the algorithm needs to be tweaked.

I have an ongoing relationship with Google. I expect it to deliver services if I follow its terms of service. The universal terms, afaict, do not mention using my real name. That means that it isn't required for all services, just g+. In that case, remove access to just the service where it's written into the ToS.

I think Google owes people like Grrl Scientist an apology and access to all of her data. Even if they do not reactivate these accounts, they should provide download links for the content.

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