Setting up a research experience for undergrads

(by proflikesubstance) May 22 2012

There are a lot of ways that undergraduates can fit into active research programs, and no, I'm not talking about all the different glassware they can wash. We tend to have at least one or two undergrad students in the lab during the academic year and many of them have contributed significantly to projects that are now being prepared for publication with them as authors.

Academic year UGs often have 3-12 hours a week they can contribute, depending on their schedule, which can be a bit of a challenge when planning experiments or tasks for them to complete. Some work their hours and go, whereas others find more of a home base in the lab - staying to do homework or study while completing their to do list. I have had tremendous success with students recruited prior to starting their junior year, but this has its own challenges that I won't get into today.

The projects that can be most helpful for the lab and the student are actually work done during the summer. Perhaps you have a site REU, fellowship mechanism or got an REU supplement to an existing grant and now you are faced with finding 400 hours or work for an inexperienced student. One of these can be daunting, but for a variety of unusual reasons, my lab ended up with four such students this summer.

With 1600 hours of time to fill for students who, for the most part are getting their first glimpse of life in the lab, it was critical that I work out a series of projects that are going to be useful but compact. Ten weeks is both a long and short period of time.

I talked to each of the people in my lab and asked them to think about projects they don't have time to deal with, but would be helpful for their work. Most of them had a couple of ideas, which we sat down to work out the feasibility of. Important questions were: 1) Is it something that can be easily taught? 2) Something that one can work on as the learn the bigger context? 3) Involve significant manual work that the lab trainee didn't have time to do, and 4) Have a defined start and end that could be met in our time frame?

The last point might be the most important for these summer projects. With academic year undergrads I often leave things open-ended and let the lab trainees guide them. For summer students it is possible (or even probable) that the ten weeks you have them are the only ten weeks they will be in the lab. I like to ensure that they have their own story to tell at the end - something they feel some ownership over. That may seem simple, but rarely is.

So today we unleash the hordes in the lab and we'll see how it all ends up in ten weeks.

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How do you make people write?

(by proflikesubstance) May 18 2012

There was some discussion last night and this morning on the twitter about training lab peeps to write. People of all ranks come into a lab with varying writing ability - sometimes an undergrad will have rare clarity whereas a postdoc appears to write with a ball pein hammer. How do you get people to at least approach a viable level of written communication?

The answer, of course, is practice. No one ever likes that answer, but it's true. You need to read and write a lot to be proficient at it and some of it can be picked up in grad school and some can't without a shit ton of work.

One of the ways I try and get people to think about what they are writing is by avoiding track changes in the early stages. Don't get me wrong, I think track changes is great. But the ability to breeze through and accept everything without thinking about why, is waaaaaay too easy. So I mark up a hard copy and send it back. This may happen again, depending on where the piece is at, but eventually we switch to track changes.

In the hard copy phase I try and focus on big things. Does the flow need to be changed? Are there major gaps? Do the figures make sense in relation to the text? Once we transition to track changes, the sleeves get rolled up. After a couple rounds of that, things should be in order. If I can, I like to circulate it through another member of the lab at a point when it is getting close to acceptable.

As a final check I like to send it out to someone outside the lab. If we have collaborators on the project then this is an obvious and critical step. If not, I may tap one of my senior colleagues to do a once over. We all have people around who delight in the opportunity to edit, use them. At each step of the way, the trainee makes the changes, not me.

There are many other ways to get people to write for practice, some of which I employ across the board and others for just certain people. It takes a lot of work on their part and a decent amount on mine. But when they get to the point where they can get something finished in just a few drafts back and forth (and act as editors on the writing of others), then it is worth the initial investment.

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Mockery, pity, kid gloves and when the gloves come off

(by proflikesubstance) May 17 2012

Ah, Civility. Always there to lean on when we don't like what is being said, but would rather blame it on how it is being said. After the initial discussion died down around Tuesday's post, along came a commenter to tsk tsk about what he perceived were personal attacks directed at Dr. Jones.

So I ask, are Dr. Jones's statements not personal attacks themselves? These were open comments on a listserv directed at a young female scientist, followed up with other "helpful suggestions" to women that reinforced the idea that they should put everything on hold in order to concentrate on science. This is direct and unambiguous bullying by a senior scientist, aimed at influencing the choices of junior scientists. Apparently that is bad, but the individual should not be held accountable.

So here is my question for the day: At what point is it okay to stand up against bullying? Where is the line between silently or quietly disagreeing with a person's point of view and making a loud statement that their viewpoint should not be tolerated by anyone under any circumstances?

If influencing people's family decisions with the threat of career stagnation isn't enough, then what is the trigger? How egregious does a statement have to be in order for us to respond? If these statements was made by a man, could me call him sexist? Or should we just consider their point of view and go on our merry way?

Micheal McCarthy suggests that by strongly disagreeing and even using sarcasm in a response, we limit the voices that will join the discussion. I would counter with, by quietly and respectfully responding we let the bullies have their say and crush voices of their targets. By passing the buck on standing up to these people, we let them ply their trade down the road. I call bullshit on that.

If a white male can't stand up and say that direct sexism (regardless of the source) is not okay, then who does?

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On work/life "balance"

(by proflikesubstance) May 15 2012

I don't want to alarm you, but a lot of the stuff people go on about when it comes to a discussion of work/life balance is about as real as unicorns. The only "balance" is in choosing which ball you are going to let drop today and deciding not to drop the same ball repeatedly. If you want to call that balance, feel free to amuse yourself.

But to me, the key is that last part: don't keep dropping the same ball. There will be days you miss important things with your kid, or push too much responsibility to your significant other. If those days build up you are looking for trouble. There also have to be days where you say "I can't make that meeting" or "I can't be in the field that long" in order to go home early.

You need to make decisions that will allow you to live your life and accept that you won't be making everyone happy all the time. This includes yourself.

If you choose yourself and your job all the time, you'll probably end up dispensing terrible advice on listserves to junior people, much like Clara Jones has done on the Ecolog-L over the last few weeks.

Dr. Jones started off by basically telling all young female scientists that: A) Babies attract bears*, B) Women go to too great of lengths to achieve their goals, C) Science and families do not mix, D) Guilt caused by having a family you can't interact with will hurt your research output, E) You ladies should be the type of women who can lose a kid and show up (on time!) to work the next day, and (my favorite), F) If you have to have kids, consider surrendering custody, like she did!

BUT WAIT! There's other ways to make a family compatible with a career in science, just freeze your eggs!

Seriously, what the hell is with all you ladies wanting to have kids before you are full professor! While we are at it, I propose to freeze one's parents so they don't get old and need help while you are on the tenure track. Probably safest to freeze any grandparents, good friends and pets while we are at it. Oh, and obviously you're gonna want to freeze your significant other** so they don't feel like you're never around.

Which one of you ladies needs a mentor? I bet we can hook you up with Dr. Jones!

If we continue to frame the discussion regarding work/life balance and gender equality in science as "How can you manage your life to be least obtrusive to your career?" then we are going to keep losing good people, and especially women, from science.

*Between babies and menstruation, I don't know how any women goes in the woods without getting mauled!

**If they are also in academics, make sure to freeze them before they get you! Being frozen for a decade or two totally kills your h-index.

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Bug girl bringing what she claimed were sea monkeys to the Guest Blogge

(by proflikesubstance) May 14 2012

Go over and say Hai!

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Whatever it takes to keep the wheels rolling

(by proflikesubstance) May 14 2012

I stopped by to talk to the college-level finance person today to discuss a couple of things and to share notes on dealing with two kids under 5. It's not unusual for us to chat and I needed to work out a few matters with her. Part way through the conversation she mentioned that I seemed to be getting money from all over the university and kiddingly (I think) asked when I was going to be shaking down the president.

If I thought the president could fund a project, I would.

The thing is, even though we have had some success at the granting game, there always seems to be another key piece of data to get or salary to cover. Part of the deal when managing a lab includes finding whatever means to make things happen - usually by digging up the money. And we have spent a lot of money, well beyond what the university promised me when I was hired.

Through various means we've managed to find ~$100k in "extra" money in the last four years. Some of that has come through applying for internal funds and some through finding myself on the wrong end of a balance sheet and having to more "actively" chase some money down. If one includes student fellowships (not TAs, but direct merit-based research fellowships for grad students), then the lab has pulled in an additional $150k or so.

Yes, this takes time away from chasing the Big Money, but sometimes you need to cobble a few things together to get you there and $250K isn't exactly small money, either. It's not always fun or comfortable, but my job is selling our science so we can keep churning out the best data possible. Sometimes that is to grant agencies and sometimes it is to the Research Office here.

Whatever it takes to enable the lab peeps to do what they do.

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Graphic Fridays: Lab Productivity

(by proflikesubstance) May 11 2012

If you are like me, you either walked into your new lab as a PI, or plan to do so, ready to roll. There is a lot that needs to get done, but how long could it take, right?

Chances are, if you got a PI job, that you did a postdoc in a lab that was running full steam. I did both previous stops in labs of assistant professors who made tenure while I was there. In both cases, the labs were established enough to be just gaining a reputation for themselves, but hadn't fully broken through yet. By the time I left each, the story was different and each one had expanded significantly.

At the time it never occurred to me to consider the early days of each lab, but thinking back, each took some time to get established. However, walking into my own lab I assumed that in a year or two I would be DOING ALL TEH SCIENCE!!!!

Hhahahaha, yeaaahhhh. About that....

I'm sure there are people who do magic in a year or two and crap nature papers like they have some sort of scientific dysentery. Good for them. But for the rest of us, a lab is built in small steps with the occasional home run and the more than occasional strike out. It is torturous at times and progress seems glacial because you always feel like you are behind. But at some point (different for everyone) you can look back and surprise yourself at the progress you have made.

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Cabo San Pukas

(by proflikesubstance) May 10 2012

It's time that shed some little on a secret that parents have held dear for quite some time. Hopefully my fellow parents won't turn on me for leaking this little bit of parenting bliss, but I'm willing to risk it.

Have you ever had a colleague who has kids? Have then often thrown around suspicious excuses for leaving early, like "my kid is sick." or "daycare has asked me to pick up my listless, vomiting child."? Yeah, right (wink, wink). Of course I don't get these questions because I can show passing interest in my child and be Daddy of the Year, but these ladies are always coming up with excuses to cut out early. Sounds sketchy, no? At least @KanneDo's coworkers are on to this ruse:

Oooo, busted. I feel like I should share with everyone what parents really do when we use such thinly veiled excuses to play hooky. We vacation at a beautiful get away called Cabo San Pukas. The beauty of this unique destination is that you don't even have to leave your very own home. In fact, you can't.


Source

Even the best day at work doesn't compare to a vacation at Cabo San Pukas, where the vomit flows like wine and the party lasts alllllll night.

Other benefits include:

- A highly qualified staff of one, sometimes two.

- More wardrobe changes than a Lady Gaga concert.

- The added bonus of joining in the vomit party when the right bug hits.

- Watching cartoons!

- A chance to visit the doctor's office!

- Drugs!

Aaawwwwwwww yeeeaaaah! So next time your coworker looks like they haven't slept in days, still has vomit on their leg and tells you they need to go home early, give them a knowing wink. Cause' you know what's goin on - it's party time at Cabo San Pukas! Be jealous. They have an excuse you just can't take advantage of to live the high life.

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If you told me five years ago I would be...

(by proflikesubstance) May 09 2012

Feeling on top of my teaching, I would have thought you were joking with me.

Getting up before 5am to work out, I would have assume you have me confused with someone else.

Be struggling to juggle the wants and needs of two small kids, you would have be confirming my fears.

Described where the lab is at in our progression, I would have thought "Cool, but a little short of World Domination, no? What is taking so long?"

Described the hatred and bigotry that has taken on mainstream status in this country, I probably would have opted to stay in Postdoc Country if possible.

It's a sad day for North Carolina and the US as a whole. Unfortunately, NC is just the latest offense and undoubtedly not the last.

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The funding rate myth

(by proflikesubstance) May 04 2012

7%. <10%. 12%. These are all funding rates I have seen in recent panel summaries and quoted widely on the intertubes and in faculty meetings. On the surface, these numbers are crippling. How is anyone supposed to be competitive when rates are so low!?!?

One thing the preproposal process gave me a greater appreciation for, however, is that those funding rates are misleading. I am not at all saying that we don't need more money for research in this country, nor am I here to say that 7% funding rates are anything but demoralizing. But those bemoaning 7% as a figure are making a flawed assumption: that all proposals are worthy of funding.

If all proposals were within a standard deviation of fundable, then a 7% chance of success would basically seem random. This is demonstrably not the case, however.

Take the preprosals as an example. Let's pretend that the panel normally fields 100 proposals and that it got the same number of preproposals (most panels saw >2X the number of preproposals than their regular proposal numbers, but work with me). Three panelists weighed in on each proposal and nearly 25% of the time, all three determined that a particular proposal was poor enough to reject outright. No discussion, it just wasn't what it needed to be. If a hypothetical panel had 100 preproposals, we're now down to 75.

Of the remaining number, another 25% just cleared the "cut" bar and were discussed, but no one felt they were in contention. Down to 50.

Of the remaining proposals, all of them had strong points and many had vocal advocates. Where they ultimately ranked was based heavily on the perceived weaknesses (if there were any) and how passionate their advocate(s) was. But even in this group, there was a clear sense of a spectrum on which they fell. And this is where some of the tough decisions start being made.

Enter the preproposals with a 20-25% invite rate.

More than anything, the 20-25% cut off represents the proposals that would be in the conversation for funding. In an ideal world we could fund these 25 proposals, but the percentage is an arbitrary number based on submission rate. So whereas a 7% funding rate is a scary number, the reality is that those seven proposals are only coming out of a 20-25 pool of proposals whether you make the cut at the preproposal stage or the full proposal stage. It doesn't matter if 100 proposals or 200 proposals are submitted, a lot of them are just not convincing or exciting to a panel.

I've heard POs make this argument more than once and never really made sense to me before going through the preproposal process. As much as I have some issues with this new process, I have to admit that it allows the culling of the bottom 50% with FAR less work (for writer and reviewer) than the previous system. This is a good thing for everyone.

So whereas funding rates are low, fretting over the funding percentage is to take an uninformed view of the process and what that percentage represents.

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