Archive for the 'Uncategorized' category

Word of the week: transcription

Feb 18 2012 Published by under Uncategorized, Word of the Week

Today's word of the week is transcription, in the biological sense. Not the process of converting speech into a written document (though I know a lot of science writers who spend a lot of time doing that, so I suppose it could count as part of the biological definition), but the part of the central dogma that is incredibly important to molecular biology. The process of information flow is this:

DNA -> RNA -> protein

This represents the flow of information in a cell at its most basic level. DNA is transcribed to RNA, RNA is translated to protein. We used to think that this flow only went in one direction. We now know (thanks to retroviruses like HIV) that RNA can transcribe back to DNA. We also know that proteins can influence DNA transcription, though whether proteins can translate back to RNA is not known (it seems like a big leap to me, but a lot of this stuff seemed like big leaps to a lot of people, only a few years ago).

And in all this, there is transcription.

Transcription describes the process of DNA -> RNA, the process performed by RNA polymerase and other enzymes, which break up the bonds between two DNA strands, make a new RNA pair to one of them (RNA nucleotides are just like DNA nucleotides, with the exception of Uracil for Thymine and ribose for deoxyribose), and allow the DNA to be attached to its original pair strand, ready to be transcribed again or put away for another time. Transcription is the first step of what will become gene expression, and things that affect it affect what proteins are made, and in the end, the function of the cell as a whole.

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Friday Weird Science: Millipedes "talking" dirty

Feb 17 2012 Published by under Friday Weird Science, Uncategorized

This paper is one of those papers that gives official science manuscript writing a bad name. It's not that the paper is badly written, nor is it that the science is bad (in fact it's pretty cool). No, it's the JARGON.

"...posterior surface of the posterior telopod, which is actively moved over a field of sclerotized nubs on the inner margin of..."

"seems to prevent the female from volvating..."

"...and seems to be species-specific, arguing for a species recognition function of the stridulation during courtship..."

You know what this all translates as? Millipedes. Making sexy noises for the ladies.

With their BUTTS.

But I guess reviewers wouldn't be thrilled at that kind of description.

This is the creepiest thing I've seen today.


(Source)

But they DID go most of the way with the title.

Wesener et al. "How to uncoil your partner—“mating songs” in giant pill-millipedes (Diplopoda: Sphaerotheriida)" Neturwissenschaften, 2011.

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Major Depressive Disorder and...Hypotension?

Feb 15 2012 Published by under Behavioral Neuro, Uncategorized

I got a reader question in my inbox recently which caused me to go on an instant pubmed hunt: is there a link between hypotension and major depressive disorder, and if so, does increasing blood pressure help? And the more I dug, the more I realized that the answer is both very complicated...and pretty unknown. So today I'm going to talk a bit about hypotension and major depressive disorder. I've got a few papers in mind, but I'm not going to focus on a specific one. And if anyone has any better insights or information, please do chime in in the comments! This is an area to which Sci is not accustomed.

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Gum Chewing for Weight Loss, Does Chewing Help?

Feb 01 2012 Published by under Health Care/Medicine, Uncategorized

As preparation for this post and in the interests of full disclosure, I felt the need to pop in a piece of gum while writing. Never mind that the only gum I could find was caffeinated. That gives this post a little extra...zest.

Anyway, in talking with several friends over the years about methods of weight loss, especially controlling cravings and preventing snacking, many of them have mentioned that they chew a lot of sugar free gum. Some said it helped prevent cravings, others said it fooled them into not thinking they were hungry. Me, I feel like it stops me from eating because it feels like I've just brushed my teeth. But I've always wondered, does it really work? Does chewing gum help with your weight loss?

Luckily, the boys over at Obesity Panacea found out for me. And sadly, the answer is apparently no. :(

Shikany, et al. "Randomized Controlled Trial of Chewing Gum for Weight Loss" Intervention and Prevention, 2011.

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Friday Weird Science: Is that ostrich flirting with me?

Jan 13 2012 Published by under Friday Weird Science, Uncategorized

So I don't know about you, but I have the WORST time getting my ostriches to get it on. I tried romantic lighting, mood music, hot tubs. But it turns out I was after all the wrong things. It turns out that ostriches...want me for ME.

Bubier et al. "Courtship behaviour of ostriches ( Struthio camelus ) towards humans under farming conditions in Britain" British Poultry Science, 2010.


(Hey there, hot stuff. Source)

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Friday Weird Science: Can you shave off your smell for an attractive armpit?

Jan 06 2012 Published by under Friday Weird Science, Uncategorized

Apparently more men are shaving their armpits. Apparently this is a "thing". If it is a "thing", I really hope it wasn't brought into fashion by these guys:


(You SHOW those shaved pits there, honey)

Anyway, the question becomes...why shave your pits. It might interest you to know that humans have a relatively high amount of pit hair compared to other primates. We're mostly hairless, but we've got more hair there. Naturally, scientists start wondering why (you know you're a scientist when you look at that picture up there and think to yourself "hmmm...why does he shave his pits? What EFFECT does that have? I should test this..."). And scientists start thinking of smell.

Smell (in this case the scientists call it 'chemical ecology') has become a big thing recently in studies of humans. Do we smell only what we consciously smell? If not, what DO we smell? And WHY? Do we sense "phermones"? Studies of male sweat and women sniffing it and studies of female strippers in the luteal phase have abounded. And the current answer appears to be...we don't know. There are no yet identified chemicals that could count as phermones. Studies of women sniffing men's sweat have shown effects in what they prefer, but is that only a function of menstrual cycle, or is it a function of something they're smelling? Whatever it is, we don't know what we're smelling.

But we do know we have a lot of armpit hair. And one of the things hair does is trap odorants (doesn't your hair smell nice with all that new shampoo?). And if you've got hair in your pits...well you're going to trap odorants from your pits. And if you DON'T have hair in your pits...well what happens then!? Scientific minds want to know.

Not only that, they want to compare it to the smell of a beaver's butt.

Kohoutova et al. "Shaving of axillary hair has only a transient effect on perceived body odor pleasantness" Behavior, Ecology, and Sociobiology, 2011.

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The only thing birds have to fear is fear itself

Dec 21 2011 Published by under Evolution, Natural Sciences, Uncategorized

Well, at least, the only thing THESE birds have to fear is fear itself.

This is one of those studies that, when you lay it out, seems really...simple. Clear layout. Clear results. But it challenges a lot of the things that we once assumed about predator:prey relationships. Most particularly, it overturns the idea that the only thing making prey die from predation is the predators themselves.

This seems really simple, right? Fox eats bunny, lots of foxes mean the bunny population declines. Just foxes being AROUND bunnies (but eating, say, SmartOnes meals or something), well the bunnies wouldn't get eaten and the prey population would stay the same or even increase. Right?

Well...wrong. It turns out that sometimes what the prey population has to fear, is FEAR of predation itself.

Zanette et al. "Perceived Predation Risk Reduces the Number of Offspring Songbirds Produce per Year" Science, 2011.


(this is a full video by the authors, showing the results of their finding! Wish more people could do this!)

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Friday Weird Science: The Erection of the Ostrich

Dec 16 2011 Published by under Friday Weird Science, Uncategorized

I saw this last week, and while the world may have moved on, I CANNOT let the ostrich penis rest. So now it is time to talk about the ostrich, and about the head of the ostrich that never gets buried in the sand, if you know what I mean. I mean, the debate was CONTENTIOUS. WHAT was keeping those ostriches HARD? The world needs to know! Blood or lymph, blood or lymph, we need a study that will put this debate to bed (as it were). And now, a study has come! (You see that I did there). So of course I had to cover it. While other places have talked about the study, I felt they missed a couple of points (there are photos of EMU PENISES AND OMG THEY ARE WEIRD), and they missed something else. This paper...is MASSIVELY quote-worthy. Just you wait.

P. L. R. Brennan & R. O. Prum. "The erection mechanism of the ratite penis" Journal of Zoology, 2011.

(pictures below the fold NSFW. Well, if you know what you're looking at, anyway)

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Do you love Science? Well, that depends, do you like sleep?

Dec 15 2011 Published by under Academia, Uncategorized

In the wrapup of the recent Nobel ceremonies (always much less feted than the actual announcement of the winners, but there you go), there was a panel, talking to young scientists, from Nobel Prize winners, about what it takes to succeed (or at least to end up as a Nobel Prize winner).

A write up at Scientific American on the panel is here. I have to say I was...kind of dismayed. What caused my dismay is what the Nobel Laureates had to say about being successful in science. Some choice quotes below the fold, but my general impression made award winning science look like this:


(Source)

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Friday Weird Science Book Review: Dirty Minds by Kayt Sukel

Dec 09 2011 Published by under Book Reviews, Friday Weird Science, Uncategorized

Society for Neuroscience meeting. Kayt and I hung out and I think she’s fantastic fun. Also, she gave me a tshirt.)

My ears perked up when I first heard that there was a book coming out called “Dirty Minds”. I mean, it’s about neurobiology. And it’s about SEX. And the author had an ORGASM in an fMRI. For SCIENCE. Totally up my alley, this stuff.

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